Archaeal snoRNA-like C/D Box Small RNAs

Crenarchaeotes

• Pyrobaculum genus

  • Table of Pyrobaculum C/D box sRNAs ordered by family (Includes links to browser)

  • Bed and Fasta files (Load the track hub to see annotations on the browser.)

    Species	Number of sRNAs	Bed file	Sequences
    Pyrobaculum aerophilum	90	Bed	Fasta
    Pyrobaculum arsentaticum	86	Bed	Fasta
    Pyrobaculum calidifontis	92	Bed	Fasta
    Pyrobaculum islandicum	87	Bed	Fasta
    Pyrobaculum neutrophilum (formerly Thermoproteus neutrophilus)	84	Bed	Fasta
    Pyrobaculum oguniense	87	Bed	Fasta

• Other crenarchaea

  Species	Number of sRNAs	Table of sRNAs	Annotations	Fasta file
  Aeropyrum pernix	23	Table	Annotations	Fasta
  Sulfolobus acidocaldarius	29	Table	Annotations	Fasta
  Sulfolobus solfataricus	13	Table	Annotations	Fasta

Euryarchaeotes

• Pyrococcus genus

  • Table mapping Gaspin et al. Pyrococcus sRNA names onto our those we previously identified and assigned

  • Alignment of individual Pyrococcus homolog groups (57 from Omer et al., 3 additional from Gaspin et al.)

  Species	Number of sRNAs	Table of sRNAs	Annotations	Genomic Loci	Fasta file
  Pyrococcus abyssi	56	Table	Annotations	Loci	Fasta
  Pyrococcus furiosus	52	Table	Annotations	Loci	Fasta
  Pyrococcus horikoshii	51	Table	Annotations	Loci	Fasta

• Other euryarchaea

  Species	Number of sRNAs	Table of sRNAs	Annotations	Genomic Loci	Fasta file
  Archaeoglobus fulgidus	4	Table	Annotations	Loci	Fasta
  Methanococcus jannaschii	8	Table	Annotations	Loci	Fasta