tRNAviz
Summary
Compare
By Clade
By Species
By Sequence
Taxonomy
About
Data Release 1.0 (November 2018)
tRNAviz | Compare by Species
Explore and visualize tRNA sequence variation across species
[?]
Select clade groups
×
×
Add clade group
Select foci
Position
8
9
14
15
16
17
17a
18
19
20
20a
20b
21
26
32
33
34
35
36
37
38
44
45
46
47
48
54
55
56
57
58
59
60
73
1:72
2:71
3:70
4:69
5:68
6:67
7:66
10:25
11:24
12:23
13:22
27:43
28:42
29:41
30:40
31:39
49:65
50:64
51:63
52:62
53:61
V1
V2
V3
V4
V5
V11:V21
V12:V22
V13:V23
V14:V24
V15:V25
V16:V26
V17:V27
8:14
9:23
10:45
15:48
18:55
19:56
22:46
26:44
54:58
Isotype
All isotypes
Ala
Arg
Asn
Asp
Cys
Gln
Glu
Gly
His
Ile
Ile2
Leu
Lys
Met
Phe
Pro
Ser
Thr
Trp
Tyr
Val
fMet
iMet
Anticodon
All
AAA
AAC
AAG
AAT
ACA
ACC
ACG
ACT
AGA
AGC
AGG
AGT
ATA
ATC
ATG
ATT
CAA
CAC
CAG
CAT
CCA
CCC
CCG
CCT
CGA
CGC
CGG
CGT
CTA
CTC
CTG
CTT
GAA
GAC
GAG
GAT
GCA
GCC
GCG
GCT
GGA
GGC
GGG
GGT
GTA
GTC
GTG
GTT
TAA
TAC
TAG
TAT
TCA
TCC
TCG
TCT
TGA
TGC
TGG
TGT
TTA
TTC
TTG
TTT
Score
×
Position
8
9
14
15
16
17
17a
18
19
20
20a
20b
21
26
32
33
34
35
36
37
38
44
45
46
47
48
54
55
56
57
58
59
60
73
1:72
2:71
3:70
4:69
5:68
6:67
7:66
10:25
11:24
12:23
13:22
27:43
28:42
29:41
30:40
31:39
49:65
50:64
51:63
52:62
53:61
V1
V2
V3
V4
V5
V11:V21
V12:V22
V13:V23
V14:V24
V15:V25
V16:V26
V17:V27
8:14
9:23
10:45
15:48
18:55
19:56
22:46
26:44
54:58
Isotype
All isotypes
Ala
Arg
Asn
Asp
Cys
Gln
Glu
Gly
His
Ile
Ile2
Leu
Lys
Met
Phe
Pro
Ser
Thr
Trp
Tyr
Val
fMet
iMet
Anticodon
All
AAA
AAC
AAG
AAT
ACA
ACC
ACG
ACT
AGA
AGC
AGG
AGT
ATA
ATC
ATG
ATT
CAA
CAC
CAG
CAT
CCA
CCC
CCG
CCT
CGA
CGC
CGG
CGT
CTA
CTC
CTG
CTT
GAA
GAC
GAG
GAT
GCA
GCC
GCG
GCT
GGA
GGC
GGG
GGT
GTA
GTC
GTG
GTT
TAA
TAC
TAG
TAT
TCA
TCC
TCG
TCT
TGA
TGC
TGG
TGT
TTA
TTC
TTG
TTT
Score
Position
8
9
14
15
16
17
17a
18
19
20
20a
20b
21
26
32
33
34
35
36
37
38
44
45
46
47
48
54
55
56
57
58
59
60
73
1:72
2:71
3:70
4:69
5:68
6:67
7:66
10:25
11:24
12:23
13:22
27:43
28:42
29:41
30:40
31:39
49:65
50:64
51:63
52:62
53:61
V1
V2
V3
V4
V5
V11:V21
V12:V22
V13:V23
V14:V24
V15:V25
V16:V26
V17:V27
8:14
9:23
10:45
15:48
18:55
19:56
22:46
26:44
54:58
Isotype
All isotypes
Ala
Arg
Asn
Asp
Cys
Gln
Glu
Gly
His
Ile
Ile2
Leu
Lys
Met
Phe
Pro
Ser
Thr
Trp
Tyr
Val
fMet
iMet
Anticodon
All
AAA
AAC
AAG
AAT
ACA
ACC
ACG
ACT
AGA
AGC
AGG
AGT
ATA
ATC
ATG
ATT
CAA
CAC
CAG
CAT
CCA
CCC
CCG
CCT
CGA
CGC
CGG
CGT
CTA
CTC
CTG
CTT
GAA
GAC
GAG
GAT
GCA
GCC
GCG
GCT
GGA
GGC
GGG
GGT
GTA
GTC
GTG
GTT
TAA
TAC
TAG
TAT
TCA
TCC
TCG
TCT
TGA
TGC
TGG
TGT
TTA
TTC
TTG
TTT
Score
×
Add focus
Submit
Clade groups
#
Name / rank
1
Saccharomyces (genus), Schizosaccharomyces (genus)
2
Basidiomycota (phylum)
Foci
Position
Isotype
Anticodon
Score range
3:70
Gly
All
25 - 100.1
3:70
Asn
All
35 - 110
Download
PDF
JSON
Sequence feature distribution
Position
Isotype
Group
Feature
Frequency
Count