Structurally Aligned tRNAs (by Isotype & Anticodon)
Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.
Ala tRNAs
>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCGTAGATCAGGGGTA.GATCACTCCCTTGGCATGGGAGAG...........GcCCCGGGTTCAAATCCCGGCGAGTCCA... tRNA-Ala-GGC-1-1 Sc: 69.1 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCGTAGATCAGTGGCA.GATCGCTTCCTTCGCAAGGAAGAG...........GcCCGGGGTTCAAATCCCCGCGAGTCCA... tRNA-Ala-CGC-1-1 Sc: 75.1 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCATAGCTCAGTGGTA.GAGTGCCTCCTTTGCAAGGAGGAT...........GcCCAGGGTTCGAATCCCTGTGGGTCCA... tRNA-Ala-TGC-1-1 Sc: 76.9 GGGCCCATAGCTCAGTGGTA.GAGTGCCTCCTTTGCAAGGAGGAT...........GcCCAGGGTTCGAATCCCTGTGGGTCCA... tRNA-Ala-TGC-1-2 Sc: 76.9
Arg tRNAs
>>>>>>>..>>>..............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTCCTGATAGGGTAGT..GGActA.TCCTCCTGGCTTGCGGAGCCAGGG...........A.CCGGAGTTCAAATCTCCGTCAGGACG... tRNA-Arg-GCG-1-1 Sc: 60.7 >>>>>>>..>>>>............<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCCGTAGCTCAGT..GGAc.A.GAGTGCTTGGTTCCGGACCAAGAT...........GcCGCGGGTTCAAATCCCGTCGGGTCCG... tRNA-Arg-CCG-1-1 Sc: 79.2 >>>>>>>..>>>>............<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGCTTAGCTCAGTCtGGAc.A.GAGTGCTTGGCTTCGGACCAAGTT...........GcCACGGGTTCAAATCCTGTAGCGCCCA... tRNA-Arg-TCG-1-1 Sc: 72.3 >>>>>>>..>>>>............<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGTGTGGCCTAGT..GGAc.A.GGGCGAGAGGTTCCTAACCTCTCG...........AtCGCGGGTTCGAATCCCGTCACGCCCG... tRNA-Arg-CCT-1-1 Sc: 74.3 >>>>>>>..>>>>............<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCGCGTAGCTCAGTC.GGAc.A.GAGCGTCGGACTTCTAATCCGATG...........GtCGCGGGTTCGAATCCCGTCGCGCTCG... tRNA-Arg-TCT-1-1 Sc: 78.9
Asn tRNAs
Asp tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCCCGGGTGGTGTAGTGGCccA.TCATACGACCCTGTCACGGTCGTG...........ACGCGGGTTCAAATCCCGCCTCGGGCG... tRNA-Asp-GTC-1-1 Sc: 66.8 GCCCGGGTGGTGTAGTGGCccA.TCATACGACCCTGTCACGGTCGTG...........ACGCGGGTTCAAATCCCGCCTCGGGCG... tRNA-Asp-GTC-1-2 Sc: 66.8
Cys tRNAs
Glu tRNAs
>>>>>>>..>>>.............<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCTCTGTTGGTGTAGTCcGGCcaATCATATCACCCTCTCACGGTGATG...........ACCAGGGTTCGAATCCCTGACGGAGCA... tRNA-Glu-CTC-1-1 Sc: 61.2 >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCTCGGTTGGTGTAGTCcGGCcaATCATCTTGGCCTTTCGAGCCGAGG...........ACCAGGGTTCAAATCCCTGACCGAGCA... tRNA-Glu-TTC-1-1 Sc: 65.6
Gln tRNAs
>>>>>>>..>>>............<<<.>>>>>......................................<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGTCCCATGGGGTAGTGGCcaA.TCCTGTTGCCTTCTGG...............................GGGCAACG...........ACCCAGGTTCGAATCCTGGTGGGACTA... tRNA-Gln-CTG-1-1 Sc: 57.4 >>>>>>>..>>>............<<<.>>>>>......................................<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGTCCCGTGGTGTAGCGGCcaA.TCATAGCGGCCTTTGGattggtacggttcattgcgtgccgagaagacAGCCGCTG...........ACGGCGGTTCGAATCCGCCCGGGACTA... tRNA-Gln-TTG-1-1 Sc: 65.8
Gly tRNAs
>>>>>>>..>>>..........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCGTCGGTAGTGTAGTGGTA.TCACGTGACCTTGCCATGGTCACA...........ACCTGGGTTCAAATCCCAGCCGACGCA... tRNA-Gly-GCC-1-1 Sc: 69.0 GCGCTGGTAGTGTAGTGGTA.TCACGTGACCTTGCCATGGTCACA...........ACCTGGGTTCAAATCCCAGCCAGCGCA... tRNA-Gly-GCC-2-1 Sc: 68.9 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCGCCGATGGTCCAGTGGTA.GGACACGAGCTTCCCAAGCTCGGA...........GCCCGGGTTCAATTCCCGGTCGGCGCA... tRNA-Gly-CCC-1-1 Sc: 75.2 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GCACCGGTGGTCTAATGGTA.AGACATTGGCCTTCCAAGCCAATT...........ATCTGGGTTCGATTCCCAGCCGGTGCA... tRNA-Gly-TCC-1-1 Sc: 64.3
His tRNAs
Ile tRNAs
Ile2 tRNAs
Leu tRNAs
>>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGTGGGTAGCCAAGCCaGGCcaA.CGGCGCAGCGTTGAGGGCGCTGTCCTGTAG....AGGTcCGCCGGTTCAAATCCGGT.CCCACGCA... tRNA-Leu-GAG-1-1 Sc: 72.0 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCAGGGATAGCCAAGTCtGGCcaA.CGGCGCAGCGTTCAGGGCGCTGTCTCATAG....GAGTcCGCAGGTTCAAATCCTGC.TCCCTGCA... tRNA-Leu-CAG-1-1 Sc: 62.3 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGCGGGTAGCCAAGT..GGCcaA.AGGCGCAGCGCTTAGGACGCTGTGGTGTAG....ACCTtCGCAGGTTCGAACCCTGT.CCCGCGCA... tRNA-Leu-TAG-1-1 Sc: 70.5 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>>........<<<...>.>>>.......<<<.<.<<<<<<<.... GCGAGGGTAGCTAAGTCaGGAa.A.AAGCGGCGGACTCAAGATCCGCTCCCGTAG....GGGTcCGTGGGTTCAAATCCCTC.CCCTCGCA... tRNA-Leu-CAA-1-1 Sc: 81.5 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGGGTGGCTGAGCCaGGCcaA.AAGCGGCGGACTTAAGATCCGCTCCCGTAG....GGGTtCGCGAGTTCGAATCTCGT.CCCCCGCA... tRNA-Leu-TAA-1-1 Sc: 85.4
Lys tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCGGTAGCTCAGTTaGGCAGAGCGTCTGACTCTTAATCAGACG...........GtCGCGTGTTCAAATCGCGTCCGGCCCA... tRNA-Lys-CTT-1-1 Sc: 78.5 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTGGTAGCTCAGTTaGGCAGAGCGTCTGGCTTTTAACCAGACG...........GtCGGGGGTTCAAGTCCCTCCCAGCCCG... tRNA-Lys-TTT-1-1 Sc: 76.2
Met tRNAs
>>>>>>>..>>>...........<<<.>>>>>..................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCGGGTGGCTTAGCTGGAcATAGCGCCGCACTCATAgggtttcacaatcggtgcggaacgccttggaagcctccgccccccgcgaggtcatgccggcctcgcacctgggacATGCGGAG...........AtCGTGGGTTCGGAGCCCACCCCGGGCA... tRNA-Met-CAT-1-1 Sc: 69.3
iMet tRNAs
Phe tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGCCTTAGCTCAGACtGGGAGAGCACTCGACTGAAGATCGAGCT...........GtCCCCGGTTCAAATCCGGGAGGCGGCA... tRNA-Phe-GAA-1-1 Sc: 76.8 GCCGCCTTAGCTCAGACtGGGAGAGCACTCGACTGAAGATCGAGCT...........GtCCCCGGTTCAAATCCGGGAGGCGGCA... tRNA-Phe-GAA-1-2 Sc: 76.8
Pro tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGGACCGTGGGGTAGT..GGTA.TCCTCTGCCGATGGGGTCGGTAGG...........ACCTGAGTTCGACTCTCAGCGGTCCCA... tRNA-Pro-GGG-1-1 Sc: 45.7 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGGCCGGTGGGGTAGCTtGGTA.TCCTTCGGCCTTCGGGTGGCCGTA...........ACCTCAGTTCGAATCTGAGCCGGCCCA... tRNA-Pro-CGG-1-1 Sc: 68.6 >>>>>>>..>>>............<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGGACCGTGGGTTAGCCtGGTA.TACTTCGGGCCTTGGGTGCCCGTG...........ACCCCGGTTCAAATCCGGGCGGTCCCA... tRNA-Pro-TGG-1-1 Sc: 82.9
Ser tRNAs
>>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>...............<<<...>>>>>.......<<<<<<<<<<<<.... GCCAGGATGGCCGAGC..GGT..A.AGGCGCACGCCTGGAAAGCGTGTTCCCT.......c.....TGGGAtCGGGGGTTCAAATCCCTCTCCTGGCG... tRNA-Ser-GGA-1-1 Sc: 79.0 >>>>>>>..>>>>............<<<<.>>>>>.......<<<<<....>...............<.....>>>>>.......<<<<<<<<<<<<.... GCCGAGGTAGCCTAGCCcGGCc.A.AGGCGGTAGATTCGAAATCTACTGTCC..ATTCg........GACA.CGTGAGTTCAAATCTCACCCTCGGCG... tRNA-Ser-CGA-1-1 Sc: 71.5 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>...............<<<...>>>>>.......<<<<<<<<<<<<.... GGTGGGATGGCGGAGT..GGCctA.ACGCGCCTGCCTTGAAAGCAGGTTTCCTC..........A.CGGAAtCCTGGGTTCAAATCCCAGTCCCACCG... tRNA-Ser-TGA-1-1 Sc: 74.6 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<...>>...............<<....>>>>>.......<<<<<<<<<<<<.... GTTGCGGTAGCCAAGCCtGGCccA.AGGCGCTGGGTTGCTAACTCAGTG.GC..GTCAa........GC.CcCCGGGGTTCGAATCCCCGCCGCAACG... tRNA-Ser-GCT-1-1 Sc: 71.2
Thr tRNAs
>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTGGGTAGCTTAGC.GGT..A.AAGCGCGTCCTTGGTAAGGACGAG...........AcCCCGGGTTCAAATCCCGGCCTAGGCT... tRNA-Thr-GGT-1-1 Sc: 78.8 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGTGTAGCTCAGTTGGC..A.GAGCGATTCCTTCGTAAGGAATAG...........GcCGAGGGTTCAAATCCCTCCACCGGCT... tRNA-Thr-CGT-1-1 Sc: 72.9 >>>>>>>..>>...............<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCAGGAGAGCATGGGCGGTtcA.T.GCACTCGACTTGTAATCGAGAC...........TtCGTGGGTTCAAATCCCACTCCTGGCT... tRNA-Thr-TGT-1-1 Sc: 49.6
Trp tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>..............................................................................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTGTGGCCAAGCCcGGCATGGCGACTGACTCCAGaggcttggcgcccgggacgacactccagctgatatactgagcgaccgactgatcatcggtcgtgttgacgaccctctggagttccgaggtgcccaccggagatATCAGTCG...........AtCGGGGGTTCAAATCCCTCCGGCCCCA... tRNA-Trp-CCA-1-1 Sc: 67.5
Tyr tRNAs
>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CCGCTCTTAGCTCAGCCtGGCAGAGCAGCCGACTGTAGATCGGCTT...........GtCCCCCGTTCAAATCGGGGAGAGCGGA... tRNA-Tyr-GTA-1-1 Sc: 70.7 CCGCTCTTAGCTCAGCCtGGCAGAGCAGCCGACTGTAGATCGGCTT...........GtCCCCCGTTCAAATCGGGGAGAGCGGA... tRNA-Tyr-GTA-1-2 Sc: 70.7
Val tRNAs
>>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTTGGTGGTCTAGTCtGGTtATGACACCTCCTTGACATGGAGGAG...........GcCGGCAGTTCAAATCTGCCCCAACCCA... tRNA-Val-GAC-1-1 Sc: 67.0 GGGTTGGTGGTCTAGTCtGGTtATGACACCTCCTTGACATGGAGGAG...........GcCGGCAGTTCAAATCTGCCCCAACCCA... tRNA-Val-GAC-1-2 Sc: 67.0 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTTGGTGGTCTAGCCaGGTtATGACGGCTCCTTCACACGGAGCAG...........GcCGGCGGTTCGAATCCGCCCCAACCCA... tRNA-Val-CAC-1-1 Sc: 75.7 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCTCGTGGTCTAGTT.GGTtATGACGCGGCCTTTACAAGGCTGAG...........GtCGGTGGTTCGAATCCGCCCGAGCCCA... tRNA-Val-TAC-1-1 Sc: 71.2